1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTACAAGAACGATAGTGAAATCCTTGCAATGACAAACCTGATTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtctatttcttcagaaattttatctcttaattttccatgtactaatgcaagtgttatcaacttctttttgcag
species | Zea mays |
transcript | GRMZM2G132804_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAGEST: gi|32935315|gb|CF040127.1|CF040127
genomic: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
EST: TACCAGAAGAACGACATCACGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAGEST: gi|29945633|gb|CB815739.1|CB815739
genomic: TACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
EST: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAGEST: gi|60401353|gb|DN234160.1|DN234160
genomic: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
EST: TTGCAGCGTACCAGAAGAATGACATCATGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAGEST: gi|14202790|gb|BG836467.1|BG836467
genomic: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
EST: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAGEST: gi|32164838|gb|CD670156.1|CD670156
genomic: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
EST: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAG AGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
genomic: TTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtct ... ctttttgcagAGTAATAGAAGAACAATAATGGATGATCCTTTTATCCGTAACTATATTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACAAGAACGATAGTGAAATCCTTGCAATGACAAACCTGATTGCAGCGTACCAGAAGAACGACATCATGGAGTTTGAAAAGATCCTGAAGgtcagcgtctatttcttcagaaattttatctcttaattttccatgtactaatgcaagtgttatcaacttctttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG