1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
TAGGTTCTCAATTGTTGTTGCAGGATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGGGACAAAACAgtgagtcatcctctttccttttattgttgtggctttctatttcttttaatgtcacagaatagcaaaattcaaacctgtgcctattcattttttcctgctg...
species | Zea mays |
transcript | GRMZM2G107309_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGGGACAAAACA GTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGAEST: gi|9732030|gb|BE510782.1|BE510782
genomic: ATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGGGACAAAACAgtgagtcatc ... tccatttcagGTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGA
EST: ATGTGCACCATGGAAATGGCACACAAGAGATATTCGACAGGGACAAAACA GTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGAEST: gi|211416079|gb|FK952657.1|FK952657
genomic: ATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGGGACAAAACAgtgagtcatc ... tccatttcagGTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGA
EST: TATTCGACGGGGACAAAACA GTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGA
genomic: TATTCGACGGGGACAAAACAgtgagtcatc ... tccatttcagGTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGGTTCTCAATTGTTGTTGCAGGATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGGGACAAAACAgtgagtcatcctctttccttttattgttgtggctttctatttcttttaatgtcacagaatagcaaaattcaaacctgtgcctattcattttttcctgctg
- - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - AAGAGA