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ATGTATACTGATTTGGCAACAATATATGAGCGTGCTGGGCGTATTGAAGGAAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaaccatgtcttttttaatctttatattataattatactttataattatactatgtgccgtattgttattggttttgtacacttatcttctgaac...
species | Zea mays |
transcript | GRMZM2G094497_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|5915388|gb|AW053029.1|AW053029
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|31352565|gb|CD436922.1|CD436922
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|6445489|gb|AW179407.1|AW179407
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32928465|gb|CF033277.1|CF033277
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|4681248|gb|AI629918.1|AI629918
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGEST: gi|31352616|gb|CD436973.1|CD436973
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTG
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32928932|gb|CF033744.1|CF033744
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTACCGATG ATATCGCACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGCCAGAEST: gi|67022236|gb|CO450985.1|CO450985
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|211474169|gb|FL062077.1|FL062077
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|67040204|gb|CO466459.1|CO466459
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32929097|gb|CF033909.1|CF033909
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32944174|gb|CF048993.1|CF048993
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|13125954|gb|BG316629.1|BG316629
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32838699|gb|CD978380.1|CD978380
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|6056572|gb|AW090977.1|AW090977
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|33092363|gb|CF052357.1|CF052357
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32928990|gb|CF033802.1|CF033802
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32944913|gb|CF049732.1|CF049732
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|31352900|gb|CD437257.1|CD437257
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: TTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|31351441|gb|CD435798.1|CD435798
genomic: TTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|32928322|gb|CF033134.1|CF033134
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCACTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|211466584|gb|FL062035.1|FL062035
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: CAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|67020067|gb|CO448816.1|CO448816
genomic: CAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: GAACAGGCTCCATTTACC-ANATTCCTATTCTAAAACATGCCTA-CGATG ATATCACACACCCAACTCCTTGAC-TTACTGGATACATTACTGEST: gi|24934300|gb|CA452518.1|CA452518
genomic: GAACAGGCTCCATT-ACCCAGATTCCTATTCTAACA-ATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCT-GACCTTACTGGATACATTACTG
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|33101328|gb|CF061288.1|CF061288
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|6021392|gb|AW066320.1|AW066320
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|13125942|gb|BG316617.1|BG316617
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|13125963|gb|BG316638.1|BG316638
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|60343460|gb|DN210433.1|DN210433
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|13125933|gb|BG316608.1|BG316608
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTAEST: gi|4152268|gb|AI372402.1|AI372402
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTA
EST: TACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGAEST: gi|31351755|gb|CD436112.1|CD436112
genomic: TACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
EST: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATG ATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
genomic: AAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaacc ... cctaaaacagATATCACACACCCAACTCCTGACCTTACTGGATACATTACTGAGGGACAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTATACTGATTTGGCAACAATATATGAGCGTGCTGGGCGTATTGAAGGAAGAACAGGCTCCATTACCCAGATTCCTATTCTAACAATGCCTAACGATGgtaagtaaccatgtcttttttaatctttatattataattatactttataattatactatgtgccgtattgttattggttttgtacacttatcttctgaac
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC