1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTTCTAGGCTCTGGTGGTTCCAAGTTTGCAGTGAGGTTGCCTACTTTCAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttccctatccttatgtgtgttctgactttcgacacacctcccgagttttatatgttctattactccaaaccgtgctacatttcattggaatagc...
species | Zea mays |
transcript | GRMZM2G082502_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAG GTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGAEST: gi|91055261|gb|EB165679.1|EB165679
genomic: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttcc ... gaacttccagGTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGA
EST: CAAGTGGCACCCAAAAATGACAGCGTTCGTTTTGCAAGGATCAATACGAG GTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGAEST: gi|88750785|gb|DY534926.1|DY534926
genomic: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttcc ... gaacttccagGTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGA
EST: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAG GTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGAEST: gi|8367939|gb|BE050884.1|BE050884
genomic: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttcc ... gaacttccagGTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGA
EST: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAG GTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTGTATCTCGA
genomic: CAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttcc ... gaacttccagGTACCATTTGGACCTATGCAGACATGTCTTTGGGGAAGGCGTTTATCCCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCTAGGCTCTGGTGGTTCCAAGTTTGCAGTGAGGTTGCCTACTTTCAAGTGGCACCCAAAAATGACAGCGTTCGTTCTGCAAGGATCAATACGAGgtaatgttccctatccttatgtgtgttctgactttcgacacacctcccgagttttatatgttctattactccaaaccgtgctacatttcattggaatagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacctccc