Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCATGACGGAGGTCGTGCACATCCTCGCCACCATCGCACCACTCCAGCACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcctcctcctccccaatcacgtacgtacgtacatctcttgcaaaaagcgccacgcgtgcatgctgatttcaaacatggcacggcgcaccgtgcacgtacgctcaactctgcag

Basic information

species Zea mays
transcript GRMZM2G063897_T03
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|149079247|gb|EE168216.2|EE168216
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|101381689|gb|EB812902.1|EB812902
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|211379255|gb|FL380067.1|FL380067
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148965766|gb|EE016644.2|EE016644
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149074192|gb|EE162555.2|EE162555
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|93013269|gb|EB638789.1|EB638789
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|76011609|gb|DT938779.1|DT938779
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148948862|gb|EC894272.2|EC894272
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|74239346|gb|DT647260.1|DT647260
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|76011329|gb|DT938499.1|DT938499
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148965161|gb|EE015973.2|EE015973
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148944900|gb|EC890059.2|EC890059
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148958766|gb|EC905045.2|EC905045
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148941684|gb|EC886631.2|EC886631
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|71330865|gb|DR802230.1|DR802230
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148950042|gb|EC895574.2|EC895574
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149112700|gb|EE295533.2|EE295533
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148999858|gb|EE036888.2|EE036888
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148965208|gb|EE016014.2|EE016014
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149014181|gb|EE043728.2|EE043728
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148991622|gb|EE033156.2|EE033156
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|78086185|gb|DV514578.1|DV514578
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|78079839|gb|DV508251.1|DV508251
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148958131|gb|EC904330.2|EC904330
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148937765|gb|EC881974.2|EC881974
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|50333337|gb|CO528463.1|CO528463
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|37384684|gb|CF629435.1|CF629435
EST:     CGGCGCCAAGCGTCCGGAACCTTCCCATCCCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGAGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: CGGCGCCAAGCGT-CGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|50323692|gb|CO518818.1|CO518818
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148974269|gb|EE025038.2|EE025038
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149009748|gb|EE154084.2|EE154084
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|78123256|gb|DV541640.1|DV541640
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149010820|gb|EE042199.2|EE042199
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|76927186|gb|DV171168.1|DV171168
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149104766|gb|EE290224.2|EE290224
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|91874549|gb|EB404506.1|EB404506
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|88752061|gb|DY536202.1|DY536202
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|71758257|gb|DR956194.1|DR956194
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|91876076|gb|EB406033.1|EB406033
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149089434|gb|EE178675.2|EE178675
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|88757443|gb|DY541584.1|DY541584
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|71770509|gb|DR968446.1|DR968446
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|148945482|gb|EC890718.2|EC890718
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149087795|gb|EE287125.2|EE287125
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|149088849|gb|EE177980.2|EE177980
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
EST: gi|86474993|gb|DY241363.1|DY241363
EST:     ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACG                         CCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC
genomic: ACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcct ... aactctgcagCCATCGCCGCACGTCGGGCGGTGTGACCCGGAGCCTAAAGACGACGACATC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CACCATGACGGAGGTCGTGCACATCCTCGCCACCATCGCACCACTCCAGCACGGCGCCAAGCGTCGGAACCTTCCCATCGCCACCGCCTTCAACCTCACGgtgagctcctcctcctccccaatcacgtacgtacgtacatctcttgcaaaaagcgccacgcgtgcatgctgatttcaaacatggcacggcgcaccgtgcacgtacgctcaactctgcag

- - - - - - - - - - - - - - - - - - - - - - - - - -CGGCGCCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGCCACCG