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TTTCTGAGTCGCAATGGAATTGAATGCAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaattttgttttggtttgtttatatttcatctaaaaatttcaatttaaacttttttactccaacctttcttag
species | Zea mays |
transcript | GRMZM2G052403_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATAEST: gi|67034427|gb|CO462977.1|CO462977
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATAEST: gi|60399121|gb|DN231935.1|DN231935
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATAEST: gi|211051787|gb|FL187605.1|FL187605
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAANATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATAEST: gi|211051788|gb|FL187606.1|FL187606
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATAEST: gi|211048839|gb|FL187599.1|FL187599
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
EST: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAA ATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
genomic: CAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaatt ... cctttcttagATGTGGACAAGATTGTTGGATACGCAGTGAGTTATCACCTTAAGCACAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCTGAGTCGCAATGGAATTGAATGCAATGATATTGAAGAATTATTCATCAAAGACCAATCACTGAGTAATGAAAgtaagtaattttgttttggtttgtttatatttcatctaaaaatttcaatttaaacttttttactccaacctttcttag
- - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - TGAAGA