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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTGCAATTGGGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcactttttttttatcaaagctatggtcatgacatatcttaactttaagacaataataatttaactgaatccttttgtatgactttaacag

Basic information

species Zea mays
transcript GRMZM2G045241_T07
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|76294030|gb|DV033598.1|DV033598
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|32797227|gb|CD949463.1|CD949463
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|78081455|gb|DV509867.1|DV509867
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|32799719|gb|CD951955.1|CD951955
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|211252583|gb|FL430692.1|FL430692
EST:     CTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: CTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|76908596|gb|DV163020.1|DV163020
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|32800743|gb|CD952979.1|CD952979
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|211489897|gb|FL473955.1|FL473955
EST:     CCATACAAAAACAAACGGACCAA                         AAGCTGAACCAAGATTGGAACTGAACCGGTGGGATTTCAGCACAGAACCTG
genomic: CCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|32800292|gb|CD952528.1|CD952528
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
EST: gi|78117446|gb|DV535833.1|DV535833
EST:     GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTA                         AAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG
genomic: GGTACCAAGACCTGTACATGATGCTTACCATACAAAAACAAACGGACCTAgtgagtcact ... actttaacagAAGCTGAACCAAGATTGGAACTGAACCTGTGGGATTTCAGCACAGAACCTG