1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GATTTTGTTGGAGTAAATCATTATACTTCAAGACTCATTGCTCATCTCCAAAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtacttcagctatgaaggataaaaaaatattatttagataccagaggtgttcaagagcgtttcctcaggggtggggtcagagaagaggagggcca...
species | Zea mays |
transcript | GRMZM2G044092_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AAATCCAAATGATGTTTATTTCTCCCAAGTGCAACAAATGGAGCGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGGEST: gi|32804368|gb|CD956604.1|CD956604
genomic: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAACGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGGEST: gi|6227160|gb|AW155689.1|AW155689
genomic: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGAGAAAGGEST: gi|67011065|gb|CO439814.1|CO439814
genomic: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAACGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGGEST: gi|45568386|gb|CK986040.1|CK986040
genomic: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: GATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGGEST: gi|78022703|gb|DV491090.1|DV491090
genomic: GATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: AATCCAAATGATG-TTATTTCTACCAAGTGCAACAAATGGAGCGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGGEST: gi|6056670|gb|AW091075.1|AW091075
genomic: AATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
EST: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAG AAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
genomic: AAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtact ... cttttggcagAAAAATGGAATAGTGGTGAAAAAATTGGTGAAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTTGTTGGAGTAAATCATTATACTTCAAGACTCATTGCTCATCTCCAAAATCCAAATGATGTTTATTTCTACCAAGTGCAACAAATGGAGCGAATAGgtatggtacttcagctatgaaggataaaaaaatattatttagataccagaggtgttcaagagcgtttcctcaggggtggggtcagagaagaggagggcca
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