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ACTATTGGCACCATGGGAAGAATATTTCCTTAGGAGCATCAATGACTTGCCTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaagctgtctctgaagtccacattacttttggtctgttgatgtgttaacattggcttttttttgtctacaactctgcttgatttgatcaatgc...
species | Zea mays |
transcript | GRMZM2G041732_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAG GTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTATEST: gi|32857884|gb|CD997565.1|CD997565
genomic: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaa ... tcgtgagtagGTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTAT
EST: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAG GTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTATEST: gi|32930345|gb|CF035157.1|CF035157
genomic: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaa ... tcgtgagtagGTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTAT
EST: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAG GTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTATEST: gi|60399435|gb|DN232247.1|DN232247
genomic: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaa ... tcgtgagtagGTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTAT
EST: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAG GTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTAT
genomic: CTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaa ... tcgtgagtagGTCGATAAGGCTCTTGCACATGTGGAGGTTAAAGACAAGGAATCCGCTTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTATTGGCACCATGGGAAGAATATTTCCTTAGGAGCATCAATGACTTGCCTATTACAGAGGCAACACAACCATTAATTGATCTGGATACTAAGAAAAAGgtattttgaagctgtctctgaagtccacattacttttggtctgttgatgtgttaacattggcttttttttgtctacaactctgcttgatttgatcaatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA