1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACATCAAGAATTAATTATTAAATCATTGTTGGCTGCAAGGGATGCTTGCCTTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctcctttacagaactgcaagtattgtagtatagcatgttcaaagaagtatattcagtatgatgtttagcataatcacagcaacatgggagggt...
species | Zea mays |
transcript | GRMZM2G019260_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|78089474|gb|DV517848.1|DV517848
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|76285162|gb|DV024730.1|DV024730
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|71308538|gb|DR790508.1|DR790508
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|76017986|gb|DT945156.1|DT945156
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|74234774|gb|DT642688.1|DT642688
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|78093391|gb|DV521765.1|DV521765
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|8665270|gb|BE186086.1|BE186086
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: ATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|101392372|gb|EB818115.1|EB818115
genomic: ATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|60345166|gb|DN212139.1|DN212139
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGTATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|58029394|gb|CX724821.1|CX724821
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAGEST: gi|211480442|gb|FL214852.1|FL214852
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
EST: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCG ATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
genomic: TTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctc ... aattttgtagATTGAGCCAGATTCACAAACACGGCTACTTGACGCCACTATGAATATGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATCAAGAATTAATTATTAAATCATTGTTGGCTGCAAGGGATGCTTGCCTTGAGATAAGGCTTCACATGCGAGAGATGGGCATAGCAGCCGGTGTTCCGgtaaggtctcctttacagaactgcaagtattgtagtatagcatgttcaaagaagtatattcagtatgatgtttagcataatcacagcaacatgggagggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG