1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATATCCATAGGCAGAGGATTATTAATTGGATAGATAACACTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatgaattactactgtatgagcaaatatttgtcttaagtgatctttttgagcagttatttttttaccag
species | Zea mays |
transcript | GRMZM2G422938_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCAEST: gi|13490687|gb|BG517451.1|BG517451
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCAEST: gi|211467577|gb|FL331950.1|FL331950
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCAEST: gi|32835458|gb|CD975136.1|CD975136
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCAEST: gi|71533581|gb|DR784340.1|DR784340
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCAEST: gi|5846767|gb|AI999850.1|AI999850
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
EST: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAG GAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
genomic: CTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatg ... tttttaccagGAAGCTGTCAAAGGAGAGTTGTGGCGTTTGCGAGATTCAGAAGGAAAACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATCCATAGGCAGAGGATTATTAATTGGATAGATAACACTGGAGGACTTTGTGCCGCATTTGATTTCACGACAAAGGGCATTCTTCAGgtcagtaatgaattactactgtatgagcaaatatttgtcttaagtgatctttttgagcagttatttttttaccag
- - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - GGAGGA