1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTTAATAGGAACTACAATGAAGTCGAAATGTTCCGTATGATCGAAGCTGCTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggattaaaaaaaagacaggcatgcaatgcacatctcatcagacagacgagaacctaacactgccttttcccacctgcctcatctcag
species | Zea mays |
transcript | GRMZM2G355636_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGCCGTCEST: gi|211250045|gb|FL413628.1|FL413628
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTC
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGAGGTCGATCTGACTAACGGCGTTEST: gi|14245637|gb|BG874219.1|BG874219
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTTEST: gi|101387517|gb|EB815773.1|EB815773
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTTEST: gi|78545086|gb|DV622584.1|DV622584
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGCCGTCGATCTGACTAACGGCGTTEST: gi|78091057|gb|DV519431.1|DV519431
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
EST: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAG GTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
genomic: CTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggat ... ctcatctcagGTTGTGCGGGTGCTTGATAGTCTCGCCGACGTCGATCTGACTAACGGCGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTAATAGGAACTACAATGAAGTCGAAATGTTCCGTATGATCGAAGCTGCTGCAGCCTGTATTCGACATTCAGCATCCAGGAGGCCTCGGATGAGCCAGgtataaggattaaaaaaaagacaggcatgcaatgcacatctcatcagacagacgagaacctaacactgccttttcccacctgcctcatctcag
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