1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CTGCTGGACCAGGAAAATGCTTGATAAACCATGGAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttaggattttattacatgatctatggctttattactgaatatctgtctgttgcttcccaacttttttttctttccag
species | Zea mays |
transcript | GRMZM2G303631_T03 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|32845732|gb|CD985413.1|CD985413
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|32843915|gb|CD983596.1|CD983596
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|91054221|gb|EB164639.1|EB164639
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|101394205|gb|EB819037.1|EB819037
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|211449603|gb|FL033164.1|FL033164
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAHAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGCEST: gi|211449602|gb|FL033163.1|FL033163
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTEST: gi|32843844|gb|CD983525.1|CD983525
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTT
EST: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAG GAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
genomic: GAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttag ... ttctttccagGAATCTGGAGATGGGAAATGCCTGTGCCCAGCTGGTTTCCGAGGGGACGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCTGGACCAGGAAAATGCTTGATAAACCATGGAGGATGTTGGCATGAAACTCGCAACGGAAAAACATTCTCTGCTTGCCAGgtaggtttaggattttattacatgatctatggctttattactgaatatctgtctgttgcttcccaacttttttttctttccag
- - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - AGGATG