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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacatttctctgcaggctatttcattctgaccattttctttctgtagaaccgttacaaacccccttcaggagcagaatgcccattagcttctgaa...

Basic information

species Zea mays
transcript GRMZM2G177276_T01
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G177276_T01 (Zea mays), 5'ss of exon 8
lower sequence: LOC_Os06g09330.2 (Oryza sativa), 5'ss of exon 5
ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacatttctctgcaggcta-tttcattctgaccattttctttctgtagaaccgttacaaacccccttcaggagcagaatgcccattagcttctgaa---------
||||| ||||| ||||||||||||||||||| ||   |||| |  |||||||||||||||||||| ||||||||||| ||||| |||||||||||     ||| ||| | | | || | | | | | | |||    | | |||||    ||   |||        |  ||||| | ||  ||    ||  | |         
ATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGgta-----attgctcagtaagataatattaatttcatcataca-tctatgtaggtttgtagaaaatgat----aaaagcagcaagcatatattgttagggagtaacatac
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60399873|gb|DN232683.1|DN232683
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|37388163|gb|CF631288.1|CF631288
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|40334737|gb|CK368807.1|CK368807
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18163947|gb|BM333786.1|BM333786
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|78025971|gb|DV494358.1|DV494358
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18172167|gb|BM347555.1|BM347555
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|60347014|gb|DN213987.1|DN213987
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|32945073|gb|CF049892.1|CF049892
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGCGAAAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18168164|gb|BM338004.1|BM338004
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|32943110|gb|CF047929.1|CF047929
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAAAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|211145407|gb|FL467029.1|FL467029
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|78023869|gb|DV492256.1|DV492256
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|37396958|gb|CF635773.1|CF635773
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|33942242|gb|CF348842.1|CF348842
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|148928607|gb|EC873076.2|EC873076
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18165294|gb|BM335139.1|BM335139
EST:     GACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTT-AGAAGTA
genomic: GACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|24770090|gb|CA405219.1|CA405219
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|16922843|gb|BM075835.1|BM075835
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18171470|gb|BM341310.1|BM341310
EST:     CAAGAAAAGAGACGTTTAGTAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: C-AGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|37381655|gb|CF627726.1|CF627726
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|31355568|gb|CD439925.1|CD439925
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18162216|gb|BM332055.1|BM332055
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|211086702|gb|FL459710.1|FL459710
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18176018|gb|BM351124.1|BM351124
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCTTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|211086701|gb|FL459709.1|FL459709
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|76925873|gb|DV170631.1|DV170631
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|78120786|gb|DV539170.1|DV539170
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|120480304|gb|EH210803.1|EH210803
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|76925875|gb|DV170632.1|DV170632
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|78120787|gb|DV539171.1|DV539171
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|16922640|gb|BM075665.1|BM075665
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|33103288|gb|CF063248.1|CF063248
EST:     GCAGAAAAGAGACGTTTAGCAAAAGTTTCCCTTGCTTGCAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGT
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGT
EST: gi|5006188|gb|AI712250.1|AI712250
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
EST: gi|18169528|gb|BM339368.1|BM339368
EST:     GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAG                         CAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA
genomic: GCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 160

ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTACAATCAACAGCAACAATTGGAGAATACTGCCGCAGAGCCGGTGCCACAG


Block sizes: 47 (upstream exon), 49 (downstream exon)
Score: 161

ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTACAATCAACAGCAACAATTGGAGAATACTGCCGCAGAGCCGGTGCCACAG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 200

ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTACAATCAACAGCAACAATTGGAGAATACTGCCGCAGAGCCGGTGCCACAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 158

ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacat ... tctcttgcagCAAAAACTGTCCGCACTTCAGGAAACTTTTCCCAGAGTATGTTGAGAAGTACAATCAACAGCAACAATTGGAGAATACTGCCGCAGAGCCGGTGCCACAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGGACGATGCACTGACAACTGGAAGCATCAAGACGTCAGATGCAGAAAAGAGACGTTTAGCAAAAGCTTCCCTTGCTTACAATTGTGAGAGgtagatacatttctctgcaggctatttcattctgaccattttctttctgtagaaccgttacaaacccccttcaggagcagaatgcccattagcttctgaa

- - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccccttc