1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TCTGAAGGTAGAAAATGTAGTGGACTTCAGCTGGTCTCCCACTGATCCTATCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataaatttgtggaacagatacctcttataccatgtttattcaataactaatgataaaggctaaaattgatcttttctgttgaaag
species | Zea mays |
transcript | GRMZM2G174757_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGG GTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTTEST: gi|211218557|gb|FL110192.1|FL110192
genomic: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataa ... ctgttgaaagGTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
EST: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGG GTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTTEST: gi|22935446|gb|BU571721.1|BU571721
genomic: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataa ... ctgttgaaagGTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
EST: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGG GTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTTEST: gi|22546320|gb|BU098631.1|BU098631
genomic: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataa ... ctgttgaaagGTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
EST: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGG GTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTTEST: gi|22472476|gb|BU036956.1|BU036956
genomic: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataa ... ctgttgaaagGTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
EST: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGG GTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
genomic: TCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataa ... ctgttgaaagGTGAGTCTAGTGCAAATCCCTGGCAAAGAGGAGCTGCGACAGAAAAACCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGAAGGTAGAAAATGTAGTGGACTTCAGCTGGTCTCCCACTGATCCTATCATATCTCTGTTCGTGCCTGAAATGGGTGGTGGAAATCAGCCTGCGAGGgtgagcataaatttgtggaacagatacctcttataccatgtttattcaataactaatgataaaggctaaaattgatcttttctgttgaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA