1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCTTGCCGAAAATGGTGGCATTCCCATTGGTATTGGGAAGAATTCACACATCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAGgtatttcaaactgatgttctaacggtcaagaatatattggtctatttttttaccttaagataccacataatacttgatatgttattttctcctcttaatt...
species | Zea mays |
transcript | GRMZM2G163437_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAG ATACTCAACGCTGACAATGTTCAAGAAGCTGCAAGGGAGACAGACGGGTACEST: gi|32941128|gb|CF045947.1|CF045947
genomic: TCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAGgtatttcaaa ... gatcttgcagATACTCAACGCTGACAATGTTCAAGAAGCTGCAAGGGAGACAGACGGGTAC
EST: TCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAG ATACTCAACGCTGACAATGTTCAAGAAGCTGCAAGGGAGACAGACGGGTA
genomic: TCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAGgtatttcaaa ... gatcttgcagATACTCAACGCTGACAATGTTCAAGAAGCTGCAAGGGAGACAGACGGGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTTGCCGAAAATGGTGGCATTCCCATTGGTATTGGGAAGAATTCACACATCAGAAAAGCAATCATTGACAAGAATGCTCGAATTGGAGATAATGTGAAGgtatttcaaactgatgttctaacggtcaagaatatattggtctatttttttaccttaagataccacataatacttgatatgttattttctcctcttaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caagaata