1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAGAATCAATTCTAAAAGTTCATGTGAGCAGAAGAGAGCTTCCACTGAGTAAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaacttattctaccaatttcttgatcttgaccctgtagggatttcaaattgacgtgttaaataattttatgctatacag
species | Zea mays |
transcript | GRMZM2G163193_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATTEST: gi|211271702|gb|FL183888.1|FL183888
genomic: GATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATT
EST: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTTGTTGGCTGGGCGATEST: gi|211378707|gb|FL467950.1|FL467950
genomic: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGC-TTTGTTGGCTGGGCGAT
EST: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATTEST: gi|211271700|gb|FL183886.1|FL183886
genomic: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATT
EST: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATTEST: gi|32807497|gb|CD959731.1|CD959731
genomic: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATT
EST: GATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGEST: gi|211271701|gb|FL183887.1|FL183887
genomic: GATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCG
EST: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGG AGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATT
genomic: AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaactta ... tgctatacagAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAATCAATTCTAAAAGTTCATGTGAGCAGAAGAGAGCTTCCACTGAGTAAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGgtaaaacttattctaccaatttcttgatcttgaccctgtagggatttcaaattgacgtgttaaataattttatgctatacag
- - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC