1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACCGCTGCAGATGAATTGAGGTCACCTTCTGAGATTCCAGAATCTTCTACCGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacatctatatgaccgaaaggttttagcttatggttgtgtgacgacgaggcacacagatcactgatgtttcttgccttttgtttcag
species | Zea mays |
transcript | GRMZM2G162409_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAA AATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCCEST: gi|37386226|gb|CF630297.1|CF630297
genomic: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacat ... tttgtttcagAATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
EST: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAA AATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCCEST: gi|51592708|gb|CV071854.1|CV071854
genomic: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacat ... tttgtttcagAATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
EST: CCTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAA AATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCCEST: gi|13149966|gb|BG320288.1|BG320288
genomic: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacat ... tttgtttcagAATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
EST: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAA AATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGAYCCEST: gi|71426491|gb|DR807541.1|DR807541
genomic: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacat ... tttgtttcagAATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
EST: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAA AATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
genomic: CGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacat ... tttgtttcagAATAAGCTAAGGGCCGATGAAGTTGCAAGCATGAAATGTGTTTCATGATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCGCTGCAGATGAATTGAGGTCACCTTCTGAGATTCCAGAATCTTCTACCGTCAAGGAAGTTCCAGAAAACAGTCAAAATGGATCAACCAAGCAAACAAgtatgcacatctatatgaccgaaaggttttagcttatggttgtgtgacgacgaggcacacagatcactgatgtttcttgccttttgtttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA