1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatgagggagagatagttcttcaattgtactcttcagacttcttttataccatattcttcaccaatatcacattagctttgttgctttcttggcagcttacttataattgtttctattcacattgcag
species | Zea mays |
transcript | GRMZM2G158097_T03 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAG AGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAATEST: gi|32840869|gb|CD980550.1|CD980550
genomic: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatga ... cacattgcagAGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
EST: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAG AGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAATEST: gi|13389377|gb|BG462692.1|BG462692
genomic: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatga ... cacattgcagAGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
EST: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAG AGCAGATTTTTTGACACCTTCTATAAATTCTACCGTAACACAACTGATAATEST: gi|32841581|gb|CD981262.1|CD981262
genomic: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatga ... cacattgcagAGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
EST: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAG AGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAATEST: gi|32841639|gb|CD981320.1|CD981320
genomic: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatga ... cacattgcagAGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
EST: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAG AGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
genomic: TTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatga ... cacattgcagAGCAGACACTGGGACACCTTCTATAAATTCTACCGTAACACAACTGATAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCCTGCCCAAAATTTGCAAATGAAGCGACTTCGTGGAGACGAAATAAAGgtaattatgagggagagatagttcttcaattgtactcttcagacttcttttataccatattcttcaccaatatcacattagctttgttgctttcttggcagcttacttataattgtttctattcacattgcag
- - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - TGGAGA