Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTACTGGCTCCCTGGGAAATGCATTTTCTTAGTACAGTTAACGATTTGTCAATATCAGAGGCTGCAACACCTTCGGTTGATTCAAGCATTCAGGCAGCAgtaagttgtatagaattagtgcttgtgtcctatcttcccatttagcttagcttggtcaatcccagagcaaattttgttaaaagaaggtcttatcttggctaccaaagattaacaaacctggtgcctttatgttttaatattccttcttgactttatag

Basic information

species Zea mays
transcript GRMZM2G156158_T01
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32861794|gb|CF001476.1|CF001476
EST:     CGGTTGATTCAAGCATTCAGGCAGCA                         GTGAAAGACGCAGTCAGAAGAGTGGAGATGAAGAGCAAGGAATCAGCCTAC
genomic: CGGTTGATTCAAGCATTCAGGCAGCAgtaagttgta ... gactttatagGTCAAAGACGCAGTCAGAAGAGTGGAGATGAAGAGCAAGGAATCAGCCTAC
EST: gi|32861795|gb|CF001477.1|CF001477
EST:     CAATATCAGAGGCTGCAACACCTTCGGTTGATTCAAGCATTCAGGCAGCA                         GTGAAAGACGCAGTCAGAAGAGTGGAGATGAAGAGCAAGGAATCAGCCTAC
genomic: CAATATCAGAGGCTGCAACACCTTCGGTTGATTCAAGCATTCAGGCAGCAgtaagttgta ... gactttatagGTCAAAGACGCAGTCAGAAGAGTGGAGATGAAGAGCAAGGAATCAGCCTAC