1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAACTGTAAAGGCTACAGTTTATCAGTGGACATATGGAGTCTGGGCTGTACCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttcacttggaagttgtgaatttccatgattttcatgtaaccgtgatgaataacactgagtcagtgtcatctaatcttattttgcag
species | Zea mays |
transcript | GRMZM2G140726_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGG GTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCAEST: gi|76920828|gb|DV168329.1|DV168329
genomic: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttc ... tattttgcagGTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCA
EST: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGG GTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCAEST: gi|166495535|gb|EG120166.1|EG120166
genomic: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttc ... tattttgcagGTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCA
EST: CGACGGCAAGACCTCCTTGGCACCAATACGAGGGG GTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCAEST: gi|33092164|gb|CF052158.1|CF052158
genomic: CGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttc ... tattttgcagGTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCA
EST: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGG GTGGCAGCAATATTTAAGGTCGCAAACAGTAAAGATATACCTGAAATCCCAEST: gi|67025018|gb|CO453767.1|CO453767
genomic: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttc ... tattttgcagGTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCTGAAATCCCA
EST: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGG GTAGCAGCAATATTTAAGATCGCCAACAGTAAAGATATACCTTGAA-TCCC
genomic: CCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttc ... tattttgcagGTAGCAGCAATATTTAAGATCGCAAACAGTAAAGATATACCT-GAAATCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTGTAAAGGCTACAGTTTATCAGTGGACATATGGAGTCTGGGCTGTACCATTATTGAAATGGCGACGGCAAGACCTCCTTGGCACCAATACGAGGGGgtaggctttcacttggaagttgtgaatttccatgattttcatgtaaccgtgatgaataacactgagtcagtgtcatctaatcttattttgcag
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