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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATCTACTCCAAGAATCAGGTGCGACTGATGCATCAGGAAATGTGATATTGAGTGACATTGGTGTTCACATGCAACAGAAGgtttctgttagctaagtttttttatagaaatattagccaagattttttgttgggtggattttatgatttattggtagacttgtcgagtagagtttcagat...

Basic information

species Zea mays
transcript GRMZM2G139360_T06
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G139360_T06 (Zea mays), 5'ss of exon 8
lower sequence: LOC_Os08g34050.1 (Oryza sativa), 5'ss of exon 11
------------------GATCTACTCCAAGAATCAGGTGCGACTGATGCATCAGGAAATGTGATATTGAGTGACATTGGTGTTCACATGCAACAGAAGgtttctgttagctaagttttttta---tagaaatattagccaagattttttgttgggtg-gattttatgatttattggtagacttgtcgagtagagtttcagat
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TTATTCTACGTTCATTACAGGAGTTTACAAAAATCAGGTGCAACAGATGCATCTGGAAATGTGATACTTAGTGACATCGGTGTTCATATGCAACAGAAGgtgtgtatgcgataaccctcttttactttgtgctctgatgctgtagttttagaagcgcatggttgtgccacattttgttgttaaaataggtttgccttac----