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ATAAAATTTATTGTAGGACTGTATCCATTTTTAAAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaatgctctgatcaagtttttgtaattgtcatcatagcatgatggcatggttacatcaacagtgaatatattacggtgagcaactgatttctag...
species | Zea mays |
transcript | GRMZM2G133959_T03 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GATATATAGCAAG GTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTCEST: gi|71445212|gb|DR826262.1|DR826262
genomic: GATATATAGCAAGgtactgaaat ... tttggattagGTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
EST: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAG GTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTCEST: gi|78080386|gb|DV508798.1|DV508798
genomic: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaat ... tttggattagGTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
EST: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAG GTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTCEST: gi|76290046|gb|DV029614.1|DV029614
genomic: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaat ... tttggattagGTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
EST: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAG GTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTCEST: gi|71431548|gb|DR812598.1|DR812598
genomic: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaat ... tttggattagGTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
EST: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAG GTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
genomic: AAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaat ... tttggattagGTCATCCCTCCTAAGTAAATGGGCTAGTTTATTTGCATCTTTCATTGGGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAAATTTATTGTAGGACTGTATCCATTTTTAAAGATGAACAAGAGTTCTGTAACACAATCAGCAATCGGATATATAGCAAGgtactgaaatgctctgatcaagtttttgtaattgtcatcatagcatgatggcatggttacatcaacagtgaatatattacggtgagcaactgatttctag
- - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG