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ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgattttcactacagctgtttgcttttaatcgagcatattaattcaatgcctactttctttattccctgaactgtag
species | Zea mays |
transcript | GRMZM2G118316_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|149101262|gb|EE187374.2|EE187374
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|78088193|gb|DV516586.1|DV516586
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|93017256|gb|EB642776.1|EB642776
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|71757145|gb|DR955082.1|DR955082
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGCTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|71771526|gb|DR969463.1|DR969463
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|71427931|gb|DR808981.1|DR808981
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|91049687|gb|EB160105.1|EB160105
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|34391167|gb|CF384395.1|CF384395
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTTAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|211533908|gb|FL308317.1|FL308317
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTTAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|91049823|gb|EB160241.1|EB160241
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACCEST: gi|71769072|gb|DR967009.1|DR967009
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
EST: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAG GTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
genomic: ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgat ... tgaactgtagGTTTCTGTTGAACTATCATTCATGGAAGCTGTCCAAGGTTGCAGAAAAACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTTTGATAATGCATACAGAGGTGGCCAAGATGTCAAGgttagttgattttcactacagctgtttgcttttaatcgagcatattaattcaatgcctactttctttattccctgaactgtag
- - - - - - - - - - - - - - AAGATG