1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACAAGCAATCCTGCTTCATATGGTTCGGCCAATTCACAGAAACAGTTGTCTCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcctgatttatcctatatattgagtttctctgtccactttttgttttagtcacgcattagtgtccatgagtttttgatgataatttgcatggta...
species | Zea mays |
transcript | GRMZM2G113453_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAG CAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGATEST: gi|22472136|gb|BU036616.1|BU036616
genomic: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcct ... atctgttcagCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
EST: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAG CAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGATEST: gi|13516042|gb|BG518318.1|BG518318
genomic: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcct ... atctgttcagCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
EST: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAG CAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGATEST: gi|67013340|gb|CO442089.1|CO442089
genomic: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcct ... atctgttcagCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
EST: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAG CAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGATEST: gi|13126419|gb|BG316989.1|BG316989
genomic: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcct ... atctgttcagCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
EST: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAG CAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
genomic: TCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcct ... atctgttcagCAGATGGAACTAGAAATGCATACAACGCAAATGGAAACCAGTCAGCAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGCAATCCTGCTTCATATGGTTCGGCCAATTCACAGAAACAGTTGTCTCTTCCAGCAAAAGCTGGACAAACTTCCTCAGCGGGTACTATGAATGAAGgtgacatcctgatttatcctatatattgagtttctctgtccactttttgttttagtcacgcattagtgtccatgagtttttgatgataatttgcatggta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA