1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
GGAAGTGGTGGGAATAATCATGCCATTGAACATTATGAACAGACTAAATACCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtacaactgagattttacaatttactttcttgtttttttgtgtgtggaaattccaggatatgaaattctgtctccgtgctatgtatcaaacttt...
species | Zea mays |
transcript | GRMZM2G107696_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CCCTCTTGCGGCGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCEST: gi|32934870|gb|CF039682.1|CF039682
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATC
EST: CCCTCTTGCGGTGAAGCTTGGAATAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCEST: gi|116815278|gb|EC858437.1|EC858437
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACC
EST: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTCEST: gi|149014868|gb|EE044579.2|EE044579
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTC
EST: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCCTGAAGATGEST: gi|211413392|gb|FL397573.1|FL397573
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACCCTGAAGATG
EST: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTCEST: gi|76924845|gb|DV170158.1|DV170158
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTC
EST: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTCEST: gi|32929603|gb|CF034415.1|CF034415
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTC
EST: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAG ATGTTTTCTCGT
genomic: CCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtac ... gacagctcagATGTTTTCTCGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAGTGGTGGGAATAATCATGCCATTGAACATTATGAACAGACTAAATACCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGgtaattgtacaactgagattttacaatttactttcttgtttttttgtgtgtggaaattccaggatatgaaattctgtctccgtgctatgtatcaaacttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG