1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CATGATCGCCACGGCGGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactgtacacatgatcagttgaacggcctgtacatgatcagatggattcgcgccttaacgctcatccggtccggtgctctggcgtgtgcag
species | Zea mays |
transcript | GRMZM2G095126_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCGCGCCCCGGCGGATGGAACG ATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACGEST: gi|88753305|gb|DY537446.1|DY537446
genomic: GCGCGCCCCGGCGGATGGAACGgtctgtactg ... gcgtgtgcagATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
EST: CCAGAACGAGGTGTGGTGGGAGTACGCGCGCCCCGGCGGATGGAACG ATCCGGACATGCTGGAGGGGGGCAACGGGGGCAGGCCCAACAGCGAGTACGEST: gi|149080680|gb|EE169738.2|EE169738
genomic: CCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactg ... gcgtgtgcagATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
EST: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACG ATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACGEST: gi|211321684|gb|FL295978.1|FL295978
genomic: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactg ... gcgtgtgcagATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
EST: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACG ATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACGEST: gi|71767715|gb|DR965652.1|DR965652
genomic: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactg ... gcgtgtgcagATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
EST: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACG ATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
genomic: GGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactg ... gcgtgtgcagATCCGGACATGCTGGAGGTGGGCAACGGGGGCATGACCAACAGCGAGTACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGATCGCCACGGCGGACCAGAACGAGGTGTGGTCGGAGTACGCGCGCCCCGGCGGATGGAACGgtctgtactgtacacatgatcagttgaacggcctgtacatgatcagatggattcgcgccttaacgctcatccggtccggtgctctggcgtgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA