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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGATCCTCTGTCTCGCCGGCATATGCCTGGGAACGCTGGCCAAAGTGAGCGACGAGACGTTCGGGGCGCTGGGGTACACCTACACCGTCATCGCTGTCTgtaagtagctctccctcctgtcctggtgctcccctctcctggtcctcttctctgatag

Basic information

species Zea mays
transcript GRMZM2G064603_T01
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G064603_T01 (Zea mays), 5'ss of exon 8
lower sequence: LOC_Os11g22350.1 (Oryza sativa), 5'ss of exon 11
CTGATCCTCTGTCTCGCCGGCATATGCCTGGGAACGCTGGCCAAAGTGAGCGACGAGACGTTCGGGGCGCTGGGGTACACCTACACCGTCATCGCTGTCTgtaagtagctctccctcctgtcctggtgctcccctctcctggtcctcttctctg-atag-----------------------------------------
|| || ||||| || ||||| ||||||||||| || ||||||||||| || ||||||||||| || ||||| || ||||| ||||| ||||| ||||| ||||||||    |||   |||      |  |      |  |  |  |  | |  | | |                                          
CTCATACTCTGCCTTGCCGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGGATACACATACACAGTCATTGCTGTTTgtaagtattagtcctctctggttctcttttaattgatattatttttgctatacgtacaaaactaagcaataactatattatccatatacaactattttac