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GTCCCAACCAAAGAGCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtgcacactgctgtctgcttgtgttattgttttgaccaattaaatctacaatttatctgaacaaattgatgctaatgtctccctattctaaaa...
species | Zea mays |
transcript | GRMZM2G063851_T04 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|211131287|gb|FL186946.1|FL186946
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|21480820|gb|BQ577503.1|BQ577503
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|211131286|gb|FL186945.1|FL186945
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|32868179|gb|CF007861.1|CF007861
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGGTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|78109451|gb|DV527867.1|DV527867
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|67040702|gb|CO466957.1|CO466957
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGAEST: gi|74035022|gb|DT535512.1|DT535512
genomic: GCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAGTAGATGCACATCCTATGA
EST: AGTTGATGCACTATCAAAGGAAATTGCTTTGCGCGCTCAACTGGTTCCAG CTCATGTCTATAAGACAATAGATGCTCTCCCAG
genomic: AGTTGATGCACTATCAAAGGAA-TTGCTT-GCGCGCTCAACTG-TTCCAGgtattctgtg ... atggttgcagCTCATGTCTATAAGACAATAGATGCTCTCCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCCCAACCAAAGAGCAAGTTGATGCACTATCAAAGGAATTGCTTGCGCGCTCAACTGTTCCAGgtattctgtgcacactgctgtctgcttgtgttattgttttgaccaattaaatctacaatttatctgaacaaattgatgctaatgtctccctattctaaaa
- - - - - - - - - - - - - - - - AAGGAA