1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CACTTTGCTATGGGAGAAAAATGAGCCTCCAGTCAATCCTACCCGCTACAACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatggaacatacatatatcccataatctgagttctgttagctcttaacctaaaaggctacgacacatcttttacgctcttgttaag
species | Zea mays |
transcript | GRMZM2G061099_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAG GAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTGEST: gi|211218427|gb|FL445373.1|FL445373
genomic: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatgg ... tcttgttaagGAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
EST: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAG GAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTGEST: gi|211038131|gb|FL097458.1|FL097458
genomic: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatgg ... tcttgttaagGAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
EST: GTTAACACCAGAGCTCGAG GAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTGEST: gi|211038130|gb|FL097457.1|FL097457
genomic: GTTAACACCAGAGCTCGAGgtacacatgg ... tcttgttaagGAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
EST: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAG GAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTGEST: gi|32910642|gb|CF015454.1|CF015454
genomic: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatgg ... tcttgttaagGAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
EST: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAG GAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
genomic: ACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatgg ... tcttgttaagGAGAAGCTGCCACCGACGGATTCAAGGCTGAGACCAGATCAACGGCACCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACTTTGCTATGGGAGAAAAATGAGCCTCCAGTCAATCCTACCCGCTACAACTTGTCCGCATTTGCAATAACACTAAATGAGTTAACACCAGAGCTCGAGgtacacatggaacatacatatatcccataatctgagttctgttagctcttaacctaaaaggctacgacacatcttttacgctcttgttaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT