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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACATTACATTGGGAGTTGCGATAGGGTCATCAACACAGATCTCCATGTTTGTGgtaataataataggaattccataataatacatagtgtaacagatacaacaactaccctactctggttttacaatttttttgtcattagccaaatcatgttttagacagtagataccacctttttccaataattgttctggtattctttttcatgatcttcag

Basic information

species Zea mays
transcript GRMZM2G053004_T03
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G053004_T03 (Zea mays), 5'ss of exon 8
lower sequence: LOC_Os03g27960.1 (Oryza sativa), 5'ss of exon 8
GACATTACATTGGGAGTTGCGATAGGGTCATCAACACAGATCTCCATGTTTGTGgtaataataataggaattccataataatacatagtgtaacagatacaacaactaccctactctggttttacaatttttttgtcattagccaaatcatgttttagacag-tagataccacctttttccaataattgttctggt------attctttttcatgatcttcag
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GATATTACACTTGGAGTTGCCATAGGATCGTCAACACAGATCTCCATGTTTGTGgtaagaa------------cataa--atgaatagcatg----------caactaatctgctgtggttttgcaagctctgtaccgtta-caagaccatgttaatgacaactagttgttgtagtaatgttgaaactgttccaaccaacacacttttttacatgatttgcag