1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctgtaacatttcacattttcaatttggtctttctgtaacttaatttcttcttgtttccttttatcgaatatccataattctttcttgtttccttttatcgaacatccag
species | Zea mays |
transcript | GRMZM2G052926_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|31361372|gb|CD445729.1|CD445729
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: GGAAGGAACATATACGATGGCTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|211448114|gb|FL293416.1|FL293416
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: CAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|61118023|gb|DN558984.1|DN558984
genomic: CAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: AAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|78087001|gb|DV515394.1|DV515394
genomic: AAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTAEST: gi|33093843|gb|CF053837.1|CF053837
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTA
EST: GGAAGGAACATATACGATGGCTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|32943654|gb|CF048473.1|CF048473
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: GGAAGGAACATATACGATGGCTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|67014377|gb|CO443126.1|CO443126
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: GGAAGGAACATATACGATGGCTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAGEST: gi|31358368|gb|CD442725.1|CD442725
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
EST: GGAAGGAACATATACGATGGCTGCTGCCAACTAGATATTCAATATTCAAA TCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
genomic: GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctg ... gaacatccagTCTCAGTGAACTGCAAGTCCACTACAACAACGACCGATCTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAGGAACATATACGATGGTTGCTGCCAACTAGATATTCAATATTCAAAgtatgagctgtaacatttcacattttcaatttggtctttctgtaacttaatttcttcttgtttccttttatcgaatatccataattctttcttgtttccttttatcgaacatccag
- AAGGAA
- - - - - - - - - - TGCTGC