1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TGTTCACTTCATCGCATCAAATAACGATTCTGGTGTGAGATACTATGACATGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcctttggcttcttagctatttccgttacctttatgttctatatttggatcttcttgttggtgctatcattacaaggtacatctttctacacat...
species | Zea mays |
transcript | GRMZM2G048045_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|33101585|gb|CF061545.1|CF061545
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAEST: gi|32850691|gb|CD990372.1|CD990372
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACA
EST: TGGAGAGATTCCAGCTATTCAAGCATNTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTNTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|89251785|gb|DY623571.1|DY623571
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: GCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCTTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|60344231|gb|DN211204.1|DN211204
genomic: GCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|71320209|gb|DR796859.1|DR796859
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: TGGAGAGATTCCAGCTATTCAAACATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|211395425|gb|FL283715.1|FL283715
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATEST: gi|71320210|gb|DR796860.1|DR796860
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
EST: TGGAGAGATTCCAGCTATTCAAACATTTGCAGTTTGAATGGCCAGTGAAT CATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
genomic: TGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcct ... gttgatgcagCATGCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTCACTTCATCGCATCAAATAACGATTCTGGTGTGAGATACTATGACATGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATgtaggttcctttggcttcttagctatttccgttacctttatgttctatatttggatcttcttgttggtgctatcattacaaggtacatctttctacacat
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA