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TCAAAGAACAAATGGCATCCGTCTTGTTCAAACTTGGCCGCTTTGATGAATCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttactcgtgtcctctttttacttgcacatgttcatccttatttttgctccactgtaaatgggcatgagtcttgacatttgacacaacctgtgctg...
species | Zea mays |
transcript | GRMZM2G047093_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TCTGAGAGCATATACAGATCTCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCAEST: gi|32930286|gb|CF035098.1|CF035098
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
EST: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCAEST: gi|18963332|gb|BM660375.1|BM660375
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
EST: GAGAGCATATCCAGATCTCTGCTTTTTATGAATCCTGATACCTCCAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCAEST: gi|31349081|gb|CD433438.1|CD433438
genomic: GAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
EST: TCTGAGAGCATATACAGATCTCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCAEST: gi|76013182|gb|DT940352.1|DT940352
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
EST: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAAEST: gi|32933101|gb|CF037913.1|CF037913
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAA
EST: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATCGCTGTGCAAAAGTGCCTTGGCTTATACTCTGANTA-TGGTCEST: gi|32943122|gb|CF047941.1|CF047941
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGA-TAATGGTC
EST: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCCGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCAEST: gi|33095320|gb|CF055314.1|CF055314
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
EST: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAA ATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
genomic: TCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttact ... ttccactcagATACTTCATTGCTGTGCAAAAGTGCCTTGGCTTATACTCTGATAATGGTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAAGAACAAATGGCATCCGTCTTGTTCAAACTTGGCCGCTTTGATGAATCTGAGAGCATATACAGATCCCTGCTTTTTATGAATCCTGATAACTACAAgtgagttactcgtgtcctctttttacttgcacatgttcatccttatttttgctccactgtaaatgggcatgagtcttgacatttgacacaacctgtgctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA