1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGTTTTTGTTCGTTGCTTCACTGACAAGACAGTCATAGAAGATCAGATTGGGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTAgtaagttataaattattattactttgatgtattagtctagtttctctttacaatttgagtttttttctgttatatagttaacagattctttcatgtacat...
species | Zea mays |
transcript | GRMZM2G010011_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTA GCCCTGGCTACEST: gi|28910082|gb|CB331251.1|CB331251
genomic: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTAgtaagttata ... ctgactccagGCCCTGGCTAC
EST: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTA GCCCTGGCTACAGCTCTTTCAATGCTTGCTTCAGTACCACTAGGAGAACTAEST: gi|91054408|gb|EB164826.1|EB164826
genomic: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTAgtaagttata ... ctgactccagGCCCTGGCTACAGCTCTTTCAATGCTTGCTTCAGTACCACTAGGAGAACTA
EST: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTA GCCCTGGCTACAGCTCTTTCAATGCTTGCTTCAGTACCACTAGGAGAACTA
genomic: GGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTAgtaagttata ... ctgactccagGCCCTGGCTACAGCTCTTTCAATGCTTGCTTCAGTACCACTAGGAGAACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTTTTGTTCGTTGCTTCACTGACAAGACAGTCATAGAAGATCAGATTGGGGAAAAGCTGGGTTACGGTCTTTCACGTGCACCCTTTGCAACCATTGTAgtaagttataaattattattactttgatgtattagtctagtttctctttacaatttgagtttttttctgttatatagttaacagattctttcatgtacat
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