1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AGATGCTTCTAAGGCTTTGTCCCGTGCTGTTTGCATTGCTGTACGATACAGCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctatatttataataccgagctccgagcctcttgtattgccatttatccatcttctttataatctgtcaatttctttccaattggacaccaatatt...
species | Zea mays |
transcript | GRMZM5G864319_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|211453988|gb|FL038181.1|FL038181
genomic: GTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|211453987|gb|FL038180.1|FL038180
genomic: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|78089952|gb|DV518326.1|DV518326
genomic: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|211132734|gb|FL016682.1|FL016682
genomic: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|211453989|gb|FL038182.1|FL038182
genomic: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAEST: gi|211132737|gb|FL016685.1|FL016685
genomic: GTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
EST: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGACCTGAGACTAAG GTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
genomic: GCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctata ... ctggttacagGTCCTTGATTACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATGCTTCTAAGGCTTTGTCCCGTGCTGTTTGCATTGCTGTACGATACAGCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGgtattctatatttataataccgagctccgagcctcttgtattgccatttatccatcttctttataatctgtcaatttctttccaattggacaccaatatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG