1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCACAAGGATCCCACGAACGAGATGATGAGgtatgcttaccgtactatttatgtaaatgtttatattgttttacttcaatacggtcaatgtaagattggtgcatggtcaatacttttgattggataattgaaaacatattgtatcatgctataacagacatggatttatctgtgagctgatttctgtgcatgtatttcag
species | Zea mays |
transcript | GRMZM5G812498_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCACAAGGATCCCACGAACGAGATGATGAG GATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGTEST: gi|60399315|gb|DN232129.1|DN232129
genomic: GCACAAGGATCCCACGAACGAGATGATGAGgtatgcttac ... tgtatttcagGATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGT
EST: GCACAAGGATCCCACGAACGAGATGATGAG GATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGTEST: gi|32803595|gb|CD955831.1|CD955831
genomic: GCACAAGGATCCCACGAACGAGATGATGAGgtatgcttac ... tgtatttcagGATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGT
EST: GATCCCACGAACGAGATGATGAG GATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGT
genomic: GATCCCACGAACGAGATGATGAGgtatgcttac ... tgtatttcagGATGTCTACTTTGATGACGAGTCAGCTGAAGTAGTAATATCTTCATTGTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCACAAGGATCCCACGAACGAGATGATGAGgtatgcttaccgtactatttatgtaaatgtttatattgttttacttcaatacggtcaatgtaagattggtgcatggtcaatacttttgattggataattgaaaacatattgtatcatgctataacagacatggatttatctgtgagctgatttctgtgcatgtatttcag
- - - - - - - - - GAGATG