1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TGATGTATACTCTTTCGGGGTTGTGTTAGTGGAACTTGTCACTGGGCGGAAGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttacatattcgatcctcatttctccttagtcaagccttttttttggatggcttagagcttaagacattttgcttcacagtcacagtaatgactaa...
species | Zea mays |
transcript | GRMZM2G480607_T06 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|18963101|gb|BM660240.1|BM660240
genomic: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: AGGCTGTTGACATTAGCCGACCAAAGGGTCAGCAGTTACTAGCTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|29129926|gb|CB380630.1|CB380630
genomic: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|18655098|gb|BM499903.1|BM499903
genomic: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: CAAAGGGTCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|149095516|gb|EE181172.2|EE181172
genomic: CAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: TCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|60349296|gb|DN216269.1|DN216269
genomic: TCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGAEST: gi|18963177|gb|BM660284.1|BM660284
genomic: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
EST: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGG GCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
genomic: AGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttaca ... gattgtacagGCACGCCCATTCTTGGAGGAGTATGCAATTGACGAGCTCATAGACCCACGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGTATACTCTTTCGGGGTTGTGTTAGTGGAACTTGTCACTGGGCGGAAGGCTGTTGACATTAACCGACCAAAGGGTCAGCAGTTACTAACTGAATGGgtgagttacatattcgatcctcatttctccttagtcaagccttttttttggatggcttagagcttaagacattttgcttcacagtcacagtaatgactaa
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT