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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTTAATAGAAAGTGCATGCTCAGTGGAGAGAGTTGAAGAAACTTTGGATACACTGATACCAATGCTTCCTGAAATGCAATATTTCCGCTTTAATCCAGgtaattcaacttcaaaggaatcccttaaaatttgctagaagagaaactattaacttgttgtgcgctgtagcaacacaaccataatttgttgtgtactacttttgatatgtttcaacctaataagcctgtgtattcaaataaatgagcctcttcctactttggcag

Basic information

species Zea mays
transcript GRMZM2G451672_T01
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G451672_T01 (Zea mays), 5'ss of exon 7
lower sequence: LOC_Os07g33670.1 (Oryza sativa), 5'ss of exon 13
GTGTTAATAGAAAGTGCATGCTCAGTGGAGAGAGTTGAAGAAACTTTGGATACACTGATACCAATGCTTCCTGAAATGCAATATTTCCGCTTTAATCCAGgtaattcaacttcaaaggaatcccttaaaatttgctagaagagaaactattaacttgttgtgcgctgtagcaacacaaccataatttgttgtgtact-acttttgatatgtttcaacctaataagcctgtgtattcaaataaatgagcctcttcctactttggcag
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GTTTTAATAGAAAGTTCATGCTCTGTAGAGAGAGTTGAAGAAACTTTGGATACACTGATACCAATGCTCCCAGAAATGCAGTATTTCCGCTTTAATCCAGgtaatttgagttccaaggaaatccacagaac-------------------------------------agcaactcgatcatagtgtactgtttaatgagttctagtacatatttacc-aatgcactttgatattgaaa-gaatgggaatcttgttactgtggcag