1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CGAGTTGCTGTGTTACATTTGGAAGAAAGGTGTGAGCGAGCAGTTGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTTgtaactcagatatcttgacgatggttaatttcaaatcggtttactcatccagtgttgacttatccaattataaaaag
species | Zea mays |
transcript | GRMZM2G420055_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTTCCATCAAATACTTT GTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTAGGACTCGCTTGAATEST: gi|211433303|gb|FL467661.1|FL467661
genomic: CTTCCATCAAATACTTTgtaactcaga ... ttataaaaagGTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTACGACTCGCTTGAAT
EST: AGCGAGCAGTCGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTT GTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTAGGACTCGCTTGAATEST: gi|211112714|gb|FL478128.1|FL478128
genomic: AGCGAGCAGTTGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTTgtaactcaga ... ttataaaaagGTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTACGACTCGCTTGAAT
EST: AGCGAGCAGTTGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTT GTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTACGACTCGCTTGAAT
genomic: AGCGAGCAGTTGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTTgtaactcaga ... ttataaaaagGTTGTTTCAGGAGGTGTCGCATCAAACAAGTATGTTACGACTCGCTTGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGTTGCTGTGTTACATTTGGAAGAAAGGTGTGAGCGAGCAGTTGAATGGGCATTGAATATGGAACCTTCCATCAAATACTTTgtaactcagatatcttgacgatggttaatttcaaatcggtttactcatccagtgttgacttatccaattataaaaag
- - - - - - - - - - - - - - - - - - GAGCAG