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GGTGAAGTTTGCAATCGGACTTCTGCCAGCAATGGTTGGTGGTCAACCTTATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAGgtatgagttaaatatgctgattagactagtctctgtgtagaattgtagatgacattttgcctctcatcaatattagagagcttgtagtttgccagtattt...
species | Zea mays |
transcript | GRMZM2G410515_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAG GGTGTTCCTGATCGGGTGAACGATGAGGTTGTTATTGCAATGTCCAAGGCAEST: gi|211323424|gb|FL039624.1|FL039624
genomic: ATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAGgtatgagtta ... atcagcacagGGTGTTCCTGATCGGGTGAACGATGAGGTTTTTATTGCAATGTCCAAGGCA
EST: ATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAGCACAGEST: gi|13516086|gb|BG518362.1|BG518362
genomic: ATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATG-AAAA--AG--CAGgtatgagtta ... atcagc
EST: ATGTTGAAGCTCAAGA-GGCTTAACCGTTTCAGAATGGATGAAAAAGCAG GGTGTTCCTGATCGGGTGAACGATGAGGTTTTTATTGCAATGTCCAAGGCA
genomic: ATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAGgtatgagtta ... atcagcacagGGTGTTCCTGATCGGGTGAACGATGAGGTTTTTATTGCAATGTCCAAGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGAAGTTTGCAATCGGACTTCTGCCAGCAATGGTTGGTGGTCAACCTTATGTTGAAGCTCAAGATGGCTTAACCGTTTCAGAATGGATGAAAAAGCAGgtatgagttaaatatgctgattagactagtctctgtgtagaattgtagatgacattttgcctctcatcaatattagagagcttgtagtttgccagtattt
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG