1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GATGCGCAGGACTACGCAGAGAAGAACAATATGTTTTTCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttgagtgcatgaaatgtttgttttacataacatgcaagaggagaagcaattctagctgcaactgttaatgttattctactttagaaaagatca...
species | Zea mays |
transcript | GRMZM2G362088_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTTEST: gi|60348599|gb|DN215572.1|DN215572
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTTEST: gi|148937430|gb|EC881611.2|EC881611
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTTEST: gi|211222474|gb|FL437630.1|FL437630
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTGTEST: gi|32856098|gb|CD995779.1|CD995779
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCATCGGCATCGTGACAGAACACTTGTEST: gi|32940145|gb|CF044964.1|CF044964
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
EST: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAG GAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTGT
genomic: TCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttg ... cctgtaacagGAAATTGCAAAGAGGTTGCCTAGGCCAACGGCATCGTGACAGAACACTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCGCAGGACTACGCAGAGAAGAACAATATGTTTTTCATTGAGACGTCGGCCAAGACAGCTGATAATATAAACCAACTGTTTGAGgtatgctttgagtgcatgaaatgtttgttttacataacatgcaagaggagaagcaattctagctgcaactgttaatgttattctactttagaaaagatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT