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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCCTTGGGGAAATAGTGTCATCCTTGTCGGAGGTAAAACTGAGCCTGCTTCTGATCATTTATCAGgtttgcagatgctacatgattctccaaaacattttacaaactaggtcatgtcttccgcaaccatataatgcttaatcattccatctgtggtgcag

Basic information

species Zea mays
transcript GRMZM2G174830_T02
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78114801|gb|DV533189.1|DV533189
EST:     GTCATCCTTTGTCG-AGG-AAAACTGAGCCTGCTTCTGATCATTTATCAG                         TATGGACTTTCAATAC
genomic: GTCATCCTT-GTCGGAGGTAAAACTGAGCCTGCTTCTGATCATTTATCAGgtttgcagat ... tgtggtgcagTATGGACTTTCAATAC
EST: gi|160481567|gb|EY254399.1|EY254399
EST:     TGTCATCCTTGTCGGAGGTAAAACTGAGCCTGCTTCTGATCATTTATCAG                         TATGGACTTTCAATACAGAAACAGAGCTTTGGTCACTTATTGAAGCCAAGG
genomic: TGTCATCCTTGTCGGAGGTAAAACTGAGCCTGCTTCTGATCATTTATCAGgtttgcagat ... tgtggtgcagTATGGACTTTCAATACAGAAACAGAGCTTTGGTCACTTATTGAAGCCAAGG