1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GATTTATCATGGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAGgttgttcgatctttctcactaagcaaatttgcttccaatagtactgctttaagtgttcgccctgctatcattgatcctctttcttaaacattttctgttgttcattttgtttcgatagtttaaattttccttttcggatatgacggtcttttccttttcgccttcag
species | Zea mays |
transcript | GRMZM2G174343_T05 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAG GTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCAAGCGGCAAEST: gi|74242710|gb|DT650624.1|DT650624
genomic: GGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAGgttgttcgat ... tcgccttcagGTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCAAGCGGCAA
EST: GGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAG GTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCAAGCGGCAA
genomic: GGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAGgttgttcgat ... tcgccttcagGTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCAAGCGGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTATCATGGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAAGgttgttcgatctttctcactaagcaaatttgcttccaatagtactgctttaagtgttcgccctgctatcattgatcctctttcttaaacattttctgttgttcattttgtttcgatagtttaaattttccttttcggatatgacggtcttttccttttcgccttcag
- - - - - - - - - - - - - - - - - - - CTCCTC