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TCAGCAGATGATCTCCGAATAAATTTATGGAACTTGGAAATAAACAGCCAGAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccacttagtcataatttttttaacatttatcctaagtgttgcaaatttacttgatgaagttttgccttcccatttaacaaaaaagagattgcaa...
species | Zea mays |
transcript | GRMZM2G165418_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCTEST: gi|211384024|gb|FL015619.1|FL015619
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
EST: GAGNTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACNTGNGCGGAGTTCCATCCATCCCATTGNAATACACTGGCCTEST: gi|24934206|gb|CA452424.1|CA452424
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
EST: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCTEST: gi|211386654|gb|FL015627.1|FL015627
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
EST: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCTEST: gi|211386649|gb|FL015622.1|FL015622
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
EST: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACNCTGGCCTEST: gi|67025874|gb|CO454623.1|CO454623
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
EST: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAG AGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
genomic: GAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccac ... catatttcagAGGTGATTACATGTGCGGAGTTCCATCCATCCCATTGTAATACACTGGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCAGATGATCTCCGAATAAATTTATGGAACTTGGAAATAAACAGCCAGAGCTTTAACATTGTTGATGTGAAGCCTACAAACATGGAAGATCTAACAGgtaattccacttagtcataatttttttaacatttatcctaagtgttgcaaatttacttgatgaagttttgccttcccatttaacaaaaaagagattgcaa
- - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA