Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCCTTGGAAACAAGTACCAAACTAAATTACTTGAAATAATCGATGGCAGgttaggatctcaaatcctgttaactagttttctgttttgattccatcctaatgtttttctattccatgttttcag

Basic information

species Zea mays
transcript GRMZM2G157043_T02
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G157043_T02 (Zea mays), 5'ss of exon 7
lower sequence: GLYMA11G12260.1 (Glycine max), 5'ss of exon 7
GTCCTTGGAAACAAGTACCAAACTAAATTACTTGAAATAATCGATGGCAGgt---taggatctcaaatcctgttaactagttttctg--ttttg-attccatcctaatgtttttc----tattccatgttttcag------------------------------------------------------------
|| || ||||||||||||||||  ||||| ||||||||||| |||| |||||   |  |   |||| | || |  ||  || ||     ||||| | |  ||  |  | |   ||    ||||  |  |||  ||                                                            
GTTCTCGGAAACAAGTACCAAAGCAAATTGCTTGAAATAATTGATGCCAGgtacatttgggatcaatttctctgtacctgtgttagaaattttgtaatttattttcctatcgatcaatgtattttacttttcaagcatcactgccaatttgcaccatcctttaaaatgcctaatatttttgtgcacttaatgaag