1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGATTAAGGCAGGAGGTAATTGTGGAACTCGTGGACCAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCACgtgagtgtgctttatctgaacttcattttaacacttgaagtcatcttagtgctatatatcttatggtagtgaatggatgtgcttgaaattggcatagatg...
species | Zea mays |
transcript | GRMZM2G153138_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCAC GGATGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAGEST: gi|78089227|gb|DV517601.1|DV517601
genomic: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCACgtgagtgtgc ... cattctgcagGGATGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAG
EST: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCAC GGATGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAGEST: gi|87152145|gb|DY396934.1|DY396934
genomic: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCACgtgagtgtgc ... cattctgcagGGATGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAG
EST: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCAC GGACGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAG
genomic: CAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCACgtgagtgtgc ... cattctgcagGGATGAGGAACTTATGTCGCAGGGGCTCGCACTGAATGATGATTTGCAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATTAAGGCAGGAGGTAATTGTGGAACTCGTGGACCAATGCCGCACTTACAAGCAGAGAGTAGTGCAGCTAGTTAATTCTACCACgtgagtgtgctttatctgaacttcattttaacacttgaagtcatcttagtgctatatatcttatggtagtgaatggatgtgcttgaaattggcatagatg
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