1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttttctcaatgattgcttgatttggcctgaacactatatacttctattttctgctataacttctaagaacacatcatcactatttcaatcaca...
species | Zea mays |
transcript | GRMZM2G150251_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|33093608|gb|CF053602.1|CF053602
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|78123105|gb|DV541489.1|DV541489
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGATATGCTGTCTTTGAGATCATTTAAAACCGGAGCCATTCTCTTG TGTGGACTTTTTGTGTEST: gi|93282675|gb|EB674939.1|EB674939
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGT
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|60353103|gb|DN220076.1|DN220076
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCEST: gi|78123104|gb|DV541488.1|DV541488
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTC
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|32837706|gb|CD977384.1|CD977384
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|76020573|gb|DT947743.1|DT947743
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATGEST: gi|76282340|gb|DV021908.1|DV021908
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
EST: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTGG GGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
genomic: GGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttt ... ccatttccagGGTGGACTTTTTGTGTATGACATTTTCTGGGTGTTCTTCACTCCAGTTATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGATTGAGATGCTGTCATTGGGATCATTTAAAACCGGAGCCATTCTCTTGgtaagtgttttctcaatgattgcttgatttggcctgaacactatatacttctattttctgctataacttctaagaacacatcatcactatttcaatcaca
- - - GAGATG
- - - - ATGCTG