1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTAGCACAGCAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcgcactgtaaaacgaatggcttttgagttttcttagttattacaatagcatctccaatttcattgttatgtgatttgtgattcatttacgggtttgtatgcag
species | Zea mays |
transcript | GRMZM2G133359_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTG GTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAAEST: gi|32909943|gb|CF014755.1|CF014755
genomic: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcg ... ttgtatgcagGTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
EST: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTG GTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAAEST: gi|16925875|gb|BM078943.1|BM078943
genomic: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcg ... ttgtatgcagGTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
EST: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTG GTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAAEST: gi|88748683|gb|DY532824.1|DY532824
genomic: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcg ... ttgtatgcagGTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
EST: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTG GTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAAEST: gi|211232786|gb|FL437702.1|FL437702
genomic: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcg ... ttgtatgcagGTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
EST: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTG GTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
genomic: CAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcg ... ttgtatgcagGTTGGTATTTCCTCTGGTGCTGCAGCGATTGCTGCTATCAATGTTGGCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTAGCACAGCAGAAGCCGTTGATTCTGCAAGGGAACTTGCTCTAAAAGAGGGCCTGCTGgtgagtagcgcactgtaaaacgaatggcttttgagttttcttagttattacaatagcatctccaatttcattgttatgtgatttgtgattcatttacgggtttgtatgcag
- - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - AAGAGG