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TTTGGCCTGTGGCTGCACTGTTGTTGTCAAGCCATCAGAGTTCACACCTCTGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatctcgagttctctatcattcctgtctaattttagtatttattttgtcaaaagttactaattatgaagtaccccttataatttggaatagcaga...
species | Zea mays |
transcript | GRMZM2G128114_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GATCTTGCTCTTCAAGCTGGAATACCAGCG GGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTAEST: gi|32827158|gb|CD966836.1|CD966836
genomic: GATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: GATCTTGCTCTTCAAGCTGGAATACCAGCG GGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTAEST: gi|67026356|gb|CO455105.1|CO455105
genomic: GATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCA GGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTAEST: gi|32809534|gb|CD961768.1|CD961768
genomic: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: GATCTTGCTCTTCAAGCTGGAATACCAGCG GGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTAEST: gi|32806857|gb|CD959091.1|CD959091
genomic: GATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: GCTCTTCAAGCTGGAATACCAGCG GGTGCACTAAATGTTGTGATGGGCAGTGCTCCTGAGATAGGTGGTGCATTAEST: gi|211509962|gb|FL438235.1|FL438235
genomic: GCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCG GGTGCACTAAATGTTGTGATGGGCAATGCTCTTGAGATAGGTGATGCATTAEST: gi|67040351|gb|CO466606.1|CO466606
genomic: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
EST: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCA GGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
genomic: TGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatct ... tataattcagGGTGCACTAAATGTTGTGATGGGCAATGCTCCTGAGATAGGTGATGCATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGGCCTGTGGCTGCACTGTTGTTGTCAAGCCATCAGAGTTCACACCTCTGACATCATTAGCTGCAGCAGATCTTGCTCTTCAAGCTGGAATACCAGCGgtaatcatctcgagttctctatcattcctgtctaattttagtatttattttgtcaaaagttactaattatgaagtaccccttataatttggaatagcaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA